Package: rstanemax 0.1.5

rstanemax: Emax Model Analysis with 'Stan'

Perform sigmoidal Emax model fit using 'Stan' in a formula notation, without writing 'Stan' model code.

Authors:Kenta Yoshida [aut, cre], Trustees of Columbia University [cph]

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rstanemax.pdf |rstanemax.html✨
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NEWS

# Install 'rstanemax' in R:
install.packages('rstanemax', repos = c('https://yoshidk6.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/yoshidk6/rstanemax/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

7 exports 5 stars 1.26 score 60 dependencies 14 scripts 294 downloads

Last updated 1 years agofrom:0c9b54a513. Checks:OK: 1 NOTE: 8. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 27 2024
R-4.5-win-x86_64NOTEAug 27 2024
R-4.5-linux-x86_64NOTEAug 27 2024
R-4.4-win-x86_64NOTEAug 27 2024
R-4.4-mac-x86_64NOTEAug 27 2024
R-4.4-mac-aarch64NOTEAug 27 2024
R-4.3-win-x86_64NOTEAug 27 2024
R-4.3-mac-x86_64NOTEAug 27 2024
R-4.3-mac-aarch64NOTEAug 27 2024

Exports:%>%extract_obs_mod_frameextract_paramextract_stanfitposterior_predictposterior_predict_quantilestan_emax

Dependencies:abindbackportsBHcallrcheckmateclicolorspacecpp11descdistributionaldplyrfansifarvergenericsggplot2gluegridExtragtableinlineisobandlabelinglatticelifecycleloomagrittrMASSMatrixmatrixStatsmgcvmunsellnlmenumDerivpillarpkgbuildpkgconfigposteriorprocessxpspurrrQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrstanrstantoolsscalesStanHeadersstringistringrtensorAtibbletidyrtidyselectutf8vctrsviridisLitewithr

Simple Emax model fit with Stan

Kenta Yoshida

Rendered fromemaxmodel.Rmdusingknitr::rmarkdownon Aug 27 2024.

Last update: 2021-09-29
Started: 2019-02-15

Readme and manuals

Help Manual

Help pageTopics
The 'rstanemax' package.rstanemax-package rstanemax
Sample simulated data for exposure-response.exposure.response.sample
Sample simulated data for exposure-response with covariatesexposure.response.sample.with.cov
Extract posterior draws of key parametersextract_param
Outcome prediction from posterior distribution of parametersposterior_predict posterior_predict.stanemax posterior_predict_quantile
Bayesian Emax model fit with Stanstan_emax
Methods for stanemax objectsextract_obs_mod_frame extract_stanfit plot.stanemax print.stanemax stanemax-methods